| Modesto City Elementary School District | 2013 API | 2012 API |
| Lakewood Elementary | 930 | 927 |
| Sonoma Elementary | 857 | 869 |
| Enslen Elementary | 852 | 838 |
| Rose Avenue Elementary | 816 | 834 |
| William Garrison Elementary | 807 | 735 |
| Alberta Martone Elementary | 803 | 816 |
| La Loma Junior High | 790 | 801 |
| Elihu Beard Elementary | 783 | 806 |
| John Fremont Elementary | 783 | 785 |
| Catherine Everett Elementary | 759 | 801 |
| Roosevelt Junior High | 759 | 788 |
| John Muir Elementary | 750 | 780 |
| Fairview Elementary | 750 | 762 |
| Robertson Road Elementary | 745 | 709 |
| Wilson Elementary | 714 | 752 |
| Burbank Elementary | 713 | 706 |
| Mark Twain Junior High | 711 | 727 |
| Orville Wright Elementary | 708 | 741 |
| Franklin Elementary | 708 | 710 |
| Tuolumne Elementary | 705 | 736 |
| Harriette Kirschen Elementary | 705 | 718 |
| El Vista Elementary | 692 | 709 |
| Evelyn Hanshaw Middle | 691 | 685 |
| Bret Harte Elementary | 689 | 691 |
| James Marshall Elementary | 679 | 678 |
| Shackelford Elementary | 666 | 670 |