| Vallejo City Unified School District | 2013 API | 2012 API |
| Joseph H. Wardlaw Elementary | 833 | 828 |
| Steffan Manor Elementary | 792 | 781 |
| Annie Pennycook Elementary | 790 | 805 |
| Vallejo Charter | 781 | 802 |
| Dan Mini Elementary | 781 | 774 |
| Mare Island Technology Academy | 780 | 765 |
| MIT Academy | 775 | 723 |
| Highland Elementary | 756 | 801 |
| Johnston Cooper Elementary | 750 | 764 |
| Glen Cove Elementary | 750 | 751 |
| Mare Island Health and Fitness Academy | 746 | 766 |
| Federal Terrace Elementary | 731 | 732 |
| Lincoln Elementary | 725 | 773 |
| Jesse M. Bethel High | 724 | 730 |
| Hogan Middle | 721 | 736 |
| Beverly Hills Elementary | 718 | 749 |
| Elsa Widenmann Elementary | 710 | 683 |
| Grace Patterson Elementary | 709 | 684 |
| Loma Vista Environmental Science Academy | 678 | 713 |
| Solano Middle | 674 | 689 |
| Cave Language Academy | 658 | B |
| Franklin Middle | 633 | 675 |
| John Finney High (Continuation) | | |
| Vallejo Education Academy | | |
| Vallejo High | | |