| Tracy Joint Unified School District | 2013 API | 2012 API |
| Primary Charter | 928 | 931 |
| George Kelly Elementary | 849 | 860 |
| Wanda Hirsch Elementary | 839 | 869 |
| Art Freiler | 834 | 839 |
| Discovery Charter | 828 | 852 |
| Gladys Poet-Christian Elementary | 813 | 814 |
| Millennium Charter | 799 | 778 |
| John C. Kimball High | 794 | 802 |
| Tracy High | 776 | 773 |
| South/West Park Elementary | 767 | 775 |
| Melville S. Jacobson Elementary | 764 | 774 |
| Earle E. Williams Middle | 762 | 776 |
| Louis J. Villalovoz Elementary | 759 | 793 |
| Louis A. Bohn Elementary | 759 | 773 |
| McKinley Elementary | 755 | 791 |
| Central Elementary | 731 | 739 |
| Merrill F. West High | 729 | 726 |
| Monte Vista Middle | 715 | 739 |
| North Elementary | 714 | 694 |
| California Pacific Charter School North Central California | 707 | 671 |
| George and Evelyn Stein Continuation | 646 | 551 |
| Duncan-Russell Continuation | | |
| Excel High | | |
| Willow Community Day | | |