| School Name | API (2009) | API (2008) |
| Valley Center Primary | 864 | 842 |
| Lilac | 842 | 842 |
| Valley Center Middle | 802 | 796 |
| Valley Center Elementary Upper | 791 | 777 |
| Valley Center High | 767 | 771 |
| Pauma Elementary | 728 | 720 |
| Oak Glen High | 674 | 532 |
| Valley Center Independent Study | 614 | 654 |
| Valley Center-Pauma Adult | | |
| Palomar Mountain Elementary | | |
| Valley Center Elementary Lower | | |
| All Tribes American Indian Charter | | |