| Alameda Unified School District | 2013 API | 2012 API |
| Edison Elementary | 948 | 942 |
| Amelia Earhart Elementary | 935 | 947 |
| Bay Farm | 932 | 961 |
| Alameda Science and Technology Institute | 924 | 896 |
| Frank Otis Elementary | 911 | 906 |
| Lincoln Middle | 904 | 912 |
| Franklin Elementary | 902 | 916 |
| Donald D. Lum Elementary | 874 | 894 |
| Alameda Community Learning Center | 869 | 825 |
| Henry Haight Elementary | 854 | 831 |
| William G. Paden Elementary | 850 | 850 |
| Nea Community Learning Center | 838 | 840 |
| Alameda High | 819 | 830 |
| Ruby Bridges Elementary | 808 | 835 |
| The Academy of Alameda | 808 | 780 |
| Encinal High | 797 | 760 |
| Maya Lin | 793 | B |
| Will C. Wood Middle | 785 | 766 |
| Island High (Continuation) | 576 | 496 |
| Bay Area School of Enterprise | 543 | 541 |